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Guide to 3.0 App Development
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data visualization
(78)
network analysis
(64)
network generation
(63)
graph analysis
(59)
online data import
(47)
automation
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clustering
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pathway database
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gene expression
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export
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pathway
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networks
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disease
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gene regulation
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database
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animation
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molecular structure
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linked data
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grouping
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gene-disease association
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Connection sub-graph discovery
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centrality analysis
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3d visualization
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simulation
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Random walk with restart algorithm
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network learning
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microarrays
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gene co-expression
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cluster visualization
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social network analysis
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shortest paths
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sequence similarity
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SBML
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R
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Protein complex
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Pathway finding
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network alignment
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data manipulation
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structural biology
(4)
SPARQL
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signaling
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search
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literature mining
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kegg
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JavaScript
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gene function prediction
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flux analysis
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bayesian networks
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variant analysis
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subnetwork extraction
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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Pathway analysis
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non-coding RNA
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network repository
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inference
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graph clustering
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genome visualization
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drug repurposing
(3)
disease module
(3)
disease-disease association
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Cytoscape
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Community detection
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Cancer
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Boolean Network
(3)
Local data import
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BridgeDb
Performs ID mapping using BridgeDb and other public or custom database sources.
BridgeDb
Performs ID mapping using BridgeDb and other public or custom database sources.
(20) 21627 downloads
CyTargetLinker
Flexible network extension app
CyTargetLinker
Flexible network extension app
(40) 52152 downloads
JGF App
Import / Export OpenBEL Networks. JSON Graph Format Network App handles more restrictive BEL schema.
JGF App
Import / Export OpenBEL Networks. JSON Graph Format Network App handles more restrictive BEL schema.
(1) 9414 downloads
Omics Visualizer
Import & Visualize several data for the same node
Omics Visualizer
Import & Visualize several data for the same node
(10) 24007 downloads
WikiPathways
WikiPathways web service client and GPML file format importer
WikiPathways
WikiPathways web service client and GPML file format importer
(11) 109816 downloads
CyDataSeries
Add time series and the like to your networks.
CyDataSeries
Add time series and the like to your networks.
(1) 9083 downloads
iRegulon
Detects master regulators and cis-regulatory interactions
iRegulon
Detects master regulators and cis-regulatory interactions
(12) 39444 downloads
KEGGscape
File reader and pathway visualizer for KEGG XML (KGML) files
KEGGscape
File reader and pathway visualizer for KEGG XML (KGML) files
(4) 111162 downloads
Vital AI Graph Visualization
Use Vital AI software to connect to Databases, Servers, and Hadoop/Spark
Vital AI Graph Visualization
Use Vital AI software to connect to Databases, Servers, and Hadoop/Spark
(7) 11838 downloads
