• Submit an App
    • Submit an App
    • Guide to 3.0 App Development
  • Sign In

All Apps

Platforms

  • Desktop Apps
  • Service Apps
  • Web Apps

Categories

  • data visualization (78)
  • network analysis (64)
  • network generation (63)
  • graph analysis (59)
  • online data import (47)
  • automation (47)
  • clustering (38)
  • integrated analysis (37)
  • systems biology (33)
  • visualization (32)
  • utility (32)
  • enrichment analysis (32)
  • data integration (27)
  • core app (25)
  • annotation (24)
  • layout (22)
  • import (19)
  • pathway database (18)
  • ontology analysis (18)
  • gene expression (18)
  • PPI-network (16)
  • network comparison (16)
  • local data import (16)
  • interaction database (16)
  • functional analysis (16)
  • Network structure (14)
  • scripting (13)
  • regulatory networks (13)
  • network dynamics (13)
  • GO annotation (12)
  • Topology (10)
  • network inference (10)
  • heat map visualization (10)
  • export (10)
  • pathway (9)
  • networks (9)
  • network manipulation (9)
  • functional module detection (9)
  • disease (9)
  • cancer data analysis (9)
  • network partitioning (8)
  • gene regulation (8)
  • database (8)
  • attribute generation (8)
  • animation (8)
  • molecular structure (7)
  • linked data (7)
  • ID mapping (7)
  • grouping (7)
  • gene-disease association (7)
  • Connection sub-graph discovery (7)
  • centrality analysis (7)
  • 3d visualization (7)
  • simulation (6)
  • Random walk with restart algorithm (6)
  • network learning (6)
  • microarrays (6)
  • gene co-expression (6)
  • cluster visualization (6)
  • social network analysis (5)
  • shortest paths (5)
  • sequence similarity (5)
  • SBML (5)
  • R (5)
  • Protein complex (5)
  • Pathway finding (5)
  • network alignment (5)
  • Gene prioritization (5)
  • data manipulation (5)
  • structural biology (4)
  • SPARQL (4)
  • signaling (4)
  • search (4)
  • literature mining (4)
  • kegg (4)
  • JavaScript (4)
  • gene function prediction (4)
  • flux analysis (4)
  • bayesian networks (4)
  • variant analysis (3)
  • subnetwork extraction (3)
  • set visualization (3)
  • set analysis (3)
  • python (3)
  • protein dynamics (3)
  • post-translational modification (3)
  • pathway reconstruction (3)
  • Pathway analysis (3)
  • non-coding RNA (3)
  • network repository (3)
  • inference (3)
  • graph clustering (3)
  • genome visualization (3)
  • drug repurposing (3)
  • disease module (3)
  • disease-disease association (3)
  • Cytoscape (3)
  • Community detection (3)
  • Cancer (3)
  • Boolean Network (3)

Gene function prediction

Search for posts about gene function prediction →

Ask a question about gene function prediction →

Diffusion
Expand node selection using network propagation algorithms
Diffusion
Expand node selection using network propagation algorithms
(35)  40845 downloads
PiNGO
Finds candidate genes in a network that are associated with user-defined target GO terms.
PiNGO
Finds candidate genes in a network that are associated with user-defined target GO terms.
(4)  6471 downloads
GeneMANIA
Imports interaction networks from public databases from a list of genes with their annotations and putative functions.
GeneMANIA
Imports interaction networks from public databases from a list of genes with their annotations and putative functions.
(80)  144000 downloads
stringApp
Import and augment Cytoscape networks from STRING
stringApp
Import and augment Cytoscape networks from STRING
(34)  389986 downloads

About • Contact Us Wall of Apps