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Guide to 3.0 App Development
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data visualization
(78)
network analysis
(64)
network generation
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Connection sub-graph discovery
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centrality analysis
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simulation
(6)
Random walk with restart algorithm
(6)
network learning
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microarrays
(6)
gene co-expression
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cluster visualization
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social network analysis
(5)
shortest paths
(5)
sequence similarity
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R
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Protein complex
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network alignment
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data manipulation
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structural biology
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SPARQL
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search
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kegg
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JavaScript
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gene function prediction
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flux analysis
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bayesian networks
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variant analysis
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subnetwork extraction
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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Pathway analysis
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non-coding RNA
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network repository
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inference
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graph clustering
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genome visualization
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drug repurposing
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disease module
(3)
disease-disease association
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Cytoscape
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Community detection
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Cancer
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Boolean Network
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Network partitioning
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ClustnSee 3
clustering, module exploration and annotation
ClustnSee 3
clustering, module exploration and annotation
(1) 1478 downloads
ReactomeFIPlugIn
Explore Reactome pathways and search for diseases related pathways and network patterns using the Reactome functional interaction network
ReactomeFIPlugIn
Explore Reactome pathways and search for diseases related pathways and network patterns using the Reactome functional interaction network
(23) 141264 downloads
wk-shell-decomposition
Performs a weighted k-shell decomposition
wk-shell-decomposition
Performs a weighted k-shell decomposition
(1) 3909 downloads
Largest Subnetwork
Selects the largest connected component in a network
Largest Subnetwork
Selects the largest connected component in a network
(4) 11184 downloads
setsApp
Save and manipulate sets of nodes and edges
setsApp
Save and manipulate sets of nodes and edges
(3) 23083 downloads
