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Categories
data visualization
(78)
network analysis
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network generation
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graph analysis
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Network structure
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scripting
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GO annotation
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Topology
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export
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pathway
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networks
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cancer data analysis
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network partitioning
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gene regulation
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animation
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simulation
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Random walk with restart algorithm
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microarrays
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cluster visualization
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social network analysis
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shortest paths
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sequence similarity
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SBML
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R
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Protein complex
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Pathway finding
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Gene prioritization
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gene co-expression
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search
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kegg
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JavaScript
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gene function prediction
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flux analysis
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variant analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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Pathway analysis
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network repository
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inference
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graph clustering
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genome visualization
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Community detection
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Cancer
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Boolean Network
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bayesian networks
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Animation
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CyAnimator
Simple key-frame animation for Cytoscape
CyAnimator
Simple key-frame animation for Cytoscape
(5) 42261 downloads
Functional Enrichment Collection
Collection of apps to facilitate functional enrichment analysis. By installing this app, you will be installing a set of apps.
Functional Enrichment Collection
Collection of apps to facilitate functional enrichment analysis. By installing this app, you will be installing a set of apps.
(5) 29731 downloads
Omics Analysis Collection
Collection of apps to facilitate network analysis of omic data. By installing this app, you will be installing a set of apps.
Omics Analysis Collection
Collection of apps to facilitate network analysis of omic data. By installing this app, you will be installing a set of apps.
(1) 20551 downloads
DynNetwork
Visualize dynamic networks in Cytoscape 3.0
DynNetwork
Visualize dynamic networks in Cytoscape 3.0
(13) 22630 downloads
Mass Spec Collection
Collection of apps to facilitate network analysis of mass spectrometry data. By installing this app, you will be installing a set of apps.
Mass Spec Collection
Collection of apps to facilitate network analysis of mass spectrometry data. By installing this app, you will be installing a set of apps.
(3) 13581 downloads
Unsupported Plugins for Cytoscape 2.x
clusterMaker
Clusters densely connected nodes and node attributes in a given network.
clusterMaker
Clusters densely connected nodes and node attributes in a given network.
(22)
VistaClaraPlugin
Provides effective visualization and analysis platform to analyse expression data on a given network.
VistaClaraPlugin
Provides effective visualization and analysis platform to analyse expression data on a given network.
(5)
dynamicXpr
Dynamically change colors of nodes like a movie according to their expression level across many conditions.
dynamicXpr
Dynamically change colors of nodes like a movie according to their expression level across many conditions.
(2)
