• Submit an App
    • Submit an App
    • Guide to 3.0 App Development
  • Sign In

All Apps

Platforms

  • Desktop Apps
  • Service Apps
  • Web Apps

Categories

  • data visualization (78)
  • network analysis (64)
  • network generation (63)
  • graph analysis (59)
  • online data import (47)
  • automation (47)
  • clustering (38)
  • integrated analysis (37)
  • systems biology (33)
  • visualization (32)
  • utility (32)
  • enrichment analysis (32)
  • data integration (27)
  • core app (25)
  • annotation (24)
  • layout (22)
  • import (19)
  • pathway database (18)
  • ontology analysis (18)
  • gene expression (18)
  • PPI-network (16)
  • network comparison (16)
  • local data import (16)
  • interaction database (16)
  • functional analysis (16)
  • Network structure (14)
  • scripting (13)
  • regulatory networks (13)
  • network dynamics (13)
  • GO annotation (12)
  • Topology (10)
  • network inference (10)
  • heat map visualization (10)
  • export (10)
  • pathway (9)
  • networks (9)
  • network manipulation (9)
  • functional module detection (9)
  • disease (9)
  • cancer data analysis (9)
  • network partitioning (8)
  • gene regulation (8)
  • database (8)
  • attribute generation (8)
  • animation (8)
  • molecular structure (7)
  • linked data (7)
  • ID mapping (7)
  • grouping (7)
  • gene-disease association (7)
  • Connection sub-graph discovery (7)
  • centrality analysis (7)
  • 3d visualization (7)
  • simulation (6)
  • Random walk with restart algorithm (6)
  • network learning (6)
  • microarrays (6)
  • gene co-expression (6)
  • cluster visualization (6)
  • social network analysis (5)
  • shortest paths (5)
  • sequence similarity (5)
  • SBML (5)
  • R (5)
  • Protein complex (5)
  • Pathway finding (5)
  • network alignment (5)
  • Gene prioritization (5)
  • data manipulation (5)
  • structural biology (4)
  • SPARQL (4)
  • signaling (4)
  • search (4)
  • literature mining (4)
  • kegg (4)
  • JavaScript (4)
  • gene function prediction (4)
  • flux analysis (4)
  • bayesian networks (4)
  • variant analysis (3)
  • subnetwork extraction (3)
  • set visualization (3)
  • set analysis (3)
  • python (3)
  • protein dynamics (3)
  • post-translational modification (3)
  • pathway reconstruction (3)
  • Pathway analysis (3)
  • non-coding RNA (3)
  • network repository (3)
  • inference (3)
  • graph clustering (3)
  • genome visualization (3)
  • drug repurposing (3)
  • disease module (3)
  • disease-disease association (3)
  • Cytoscape (3)
  • Community detection (3)
  • Cancer (3)
  • Boolean Network (3)

Animation

Search for posts about animation →

Ask a question about animation →

CyAnimator
Simple key-frame animation for Cytoscape
CyAnimator
Simple key-frame animation for Cytoscape
(5)  51946 downloads
Functional Enrichment Collection
Collection of apps to facilitate functional enrichment analysis. By installing this app, you will be installing a set of apps.
Functional Enrichment Collection
Collection of apps to facilitate functional enrichment analysis. By installing this app, you will be installing a set of apps.
(5)  37712 downloads
Omics Analysis Collection
Collection of apps to facilitate network analysis of omic data. By installing this app, you will be installing a set of apps.
Omics Analysis Collection
Collection of apps to facilitate network analysis of omic data. By installing this app, you will be installing a set of apps.
(1)  26361 downloads
DynNetwork
Visualize dynamic networks in Cytoscape 3.0
DynNetwork
Visualize dynamic networks in Cytoscape 3.0
(13)  27391 downloads
Mass Spec Collection
Collection of apps to facilitate network analysis of mass spectrometry data. By installing this app, you will be installing a set of apps.
Mass Spec Collection
Collection of apps to facilitate network analysis of mass spectrometry data. By installing this app, you will be installing a set of apps.
(3)  18727 downloads

About • Contact Us Wall of Apps