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Guide to 3.0 App Development
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data visualization
(78)
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Random walk with restart algorithm
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microarrays
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gene co-expression
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shortest paths
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bayesian networks
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variant analysis
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subnetwork extraction
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set visualization
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set analysis
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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Pathway analysis
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non-coding RNA
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network repository
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inference
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graph clustering
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genome visualization
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drug repurposing
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disease module
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disease-disease association
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Cytoscape
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Community detection
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Cancer
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Boolean Network
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RDF
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protein structure analysis
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prognostic network module
(2)
Phylogenetic Trees
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Pathway acitivity analysis
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paths
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network view
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network validation
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network medicine
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Neo4j
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mutation analysis
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multilayer network
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motif detection
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molecular dynamics
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module detection
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metabolite function
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logic modelling
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json
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Interactive search
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Interactive Layout
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homology
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GWAS
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Greedy algorithm
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graphviz
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GPU Computing
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Gene Ontology
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Gene network analysis
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Feedforward loop
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Feedback loop
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Euler diagram
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entropy
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enrichment map
(2)
drug repositioning
(2)
drug
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data discretization
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collections
(2)
cancer genetics
(2)
Biomedical evidence collection
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Bioconductor
(2)
benchmark
(2)
attribute table viewer
(2)
active subnetwork
(2)
xmlrpc
(1)
Virtual Reality
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variation graph
(1)
variation consequences
(1)
variation analysis
(1)
variant effects
(1)
variant-disease associations
(1)
Triplets
(1)
three dimensional
(1)
temporal network
(1)
survival analysis
(1)
supervised model
(1)
sql
(1)
spatial co-expression
(1)
spark
(1)
Software Dependency Graphs
(1)
SLiMSearch
(1)
SLiMFinder
(1)
SLiM
(1)
Short linear motif
(1)
sequence self-similarity
(1)
semantic similarity
(1)
self-organizing map
(1)
sbgn
(1)
SABIO-RK
(1)
Rserve
(1)
Robustness
(1)
Redis
(1)
Rcaller
(1)
random networks
(1)
randomization
(1)
QSLiMFinder
(1)
Probabilistic Graphical Model
(1)
Phosphoproteomics
(1)
phenotype
(1)
petri nets
(1)
PCA
(1)
pangenomics
(1)
orthology
(1)
optimization
(1)
OpenBEL
(1)
Ontology visualization
(1)
node selection
(1)
node mapping
(1)
node.js
(1)
network extension
(1)
network controllability
(1)
mode of action
(1)
missing data estimation
(1)
miRNA-gene network
(1)
metaql
(1)
metabolic model
(1)
MDS
(1)
matlab
(1)
k-shell
(1)
Human Phenotype Ontology
(1)
hub analysis
(1)
heterogeneous molecular networks
(1)
hadoop
(1)
graphlets
(1)
Graphical Models
(1)
graph database
(1)
gps coordinates
(1)
GFA
(1)
Genetic algorithm
(1)
Gene network validation
(1)
Gene network
(1)
Fuzzy Logic
(1)
flexibility
(1)
Factor Graph
(1)
evolutionary algorithm
(1)
Evidence Collection
(1)
ebi
(1)
dvd
(1)
drug similarity network
(1)
drugome
(1)
drug-disease association
(1)
domain interaction
(1)
diseasome
(1)
disease similarity network
(1)
Disease Ontology
(1)
disease-disease networks
(1)
dedal
(1)
Covid-19
(1)
constrained layout
(1)
comorbidity
(1)
community
(1)
clone layout
(1)
cell-fate transitions
(1)
CDAPS
(1)
causal interactions
(1)
Cancer Progression
(1)
Cancer Evolution
(1)
blastn
(1)
Between-term similarity
(1)
Between-entity similarity
(1)
attribute summary
(1)
assembly
(1)
alternative splicing
(1)
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CX Support
Core App: CX JSON file reader and writer
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Core App: CX JSON file reader and writer
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D3.js Exporter
Network and Table Data Exporter for D3.js
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Network and Table Data Exporter for D3.js
(1) 15520 downloads
JGF App
Import / Export OpenBEL Networks. JSON Graph Format Network App handles more restrictive BEL schema.
JGF App
Import / Export OpenBEL Networks. JSON Graph Format Network App handles more restrictive BEL schema.
(1) 9293 downloads
CytoDiVR
Dive into your Cytoscape networks in Virtual Reality
CytoDiVR
Dive into your Cytoscape networks in Virtual Reality
(0) 949 downloads
dot-app
Import/export of Graphviz files in Cytoscape
dot-app
Import/export of Graphviz files in Cytoscape
(31) 20452 downloads
Legend Creator
A way to add legends of discrete and continuous mappings to your graph
Legend Creator
A way to add legends of discrete and continuous mappings to your graph
(5) 34996 downloads
