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data visualization
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network analysis
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export
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pathway
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Random walk with restart algorithm
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shortest paths
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sequence similarity
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R
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Protein complex
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signaling
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search
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kegg
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JavaScript
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python
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protein dynamics
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post-translational modification
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pathway reconstruction
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Pathway analysis
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inference
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Community detection
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Boolean Network
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bayesian networks
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Set analysis
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eXamine
A set-oriented visual analysis approach for annotated modules that displays set membership as contours on top of a node-link layout.
eXamine
A set-oriented visual analysis approach for annotated modules that displays set membership as contours on top of a node-link layout.
(33) 18915 downloads
Venn and Euler Diagrams
Provides a diagram view and a details view for comparing two or more Cytoscape groups at a time.
Venn and Euler Diagrams
Provides a diagram view and a details view for comparing two or more Cytoscape groups at a time.
(35) 24666 downloads
setsApp
Save and manipulate sets of nodes and edges
setsApp
Save and manipulate sets of nodes and edges
(3) 17510 downloads
Unsupported Plugins for Cytoscape 2.x
