Class AutomationVariantEnrichmentTask

java.lang.Object
org.cytoscape.work.AbstractTask
es.imim.DISGENET.internal.enrichment.AbstractEnrichmentTask
es.imim.DISGENET.internal.enrichment.AutomationVariantEnrichmentTask
All Implemented Interfaces:
org.cytoscape.work.ObservableTask, org.cytoscape.work.Task

public class AutomationVariantEnrichmentTask extends AbstractEnrichmentTask implements org.cytoscape.work.ObservableTask
  • Field Details

    • columnName

      public String columnName
    • source

      public String source
    • typeId

      public String typeId
    • universe

      public String universe
    • newNetwork

      public boolean newNetwork
    • pvalueThreshold

      public double pvalueThreshold
    • minNumVariants

      public Integer minNumVariants
  • Constructor Details

    • AutomationVariantEnrichmentTask

      public AutomationVariantEnrichmentTask(org.cytoscape.view.model.CyNetworkView cyNetworkView, Long selectedNetwork, String columnName, String source, String typeId, String universe, boolean newNetwork, double pvalueThreshold, Integer minNumVariants)
  • Method Details

    • run

      public void run(org.cytoscape.work.TaskMonitor taskMonitor) throws Exception
      Specified by:
      run in interface org.cytoscape.work.Task
      Overrides:
      run in class AbstractEnrichmentTask
      Throws:
      Exception
    • getResults

      public <R> R getResults(Class<? extends R> type)
      Specified by:
      getResults in interface org.cytoscape.work.ObservableTask
    • getResultClasses

      public List<Class<?>> getResultClasses()
      Specified by:
      getResultClasses in interface org.cytoscape.work.ObservableTask