## Examples

### Kinetic pathway models

| Edelstein 1996 - EPSP ACh event L2V4 BIOMD0000000001 A kinetic mechanism for nicotinic acetylcholine receptors based on multiple allosteric transitions. NCBITAXONTetronarce californica PMID:8983160
| Elowitz 2000 - Repressilator L2V3 BIOMD0000000012 A synthetic oscillatory network of transcriptional regulators. NCBITAXONEscherichia Coli PMID:10659856
| Goldbeter 1995 (circadian rhythms) L2V1 BIOMD0000000016 A model for circadian oscillations in the Drosophila period protein (PER). NCBITAXONDrosophila melanogaster PMID:8587874
| Hornberg 2005 (ERK cascade) L2V1 BIOMD0000000084 Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control. NCBITAXONMammalia PMID:15634347
| Koenig 2012 (Glucose Metabolism) L3V1 Kinetic model of hepatic glucose metabolism. NCBITAXONHomo sapiens PMID:22761565
| Maheshvare2023 (Glucose Metabolism) L3V2 A pathway model of glucose-stimulated insulin secretion in the pancreatic β-cell NCBITAXONHomo sapiens PMID:37600713

### Pharmacokinetics/ pharmacodynamics models (PK/PD)

| Rivaroxaban PBPK/PD model L3V2 Model of rivaroxaban pharmacokinetics and pharmacodynamics in Homo sapiens (human) NCBITAXONHomo sapiens rivaroxaban-model
| Glimepiride PBPK/PD model L3V2 Model of glimepiride pharmacokinetics in Homo sapiens (human) NCBITAXONHomo sapiens glimepiride-model

### Signaling models (Qualitative models)

| hsa04360 KEGG pathway L2V1 Model of axon guidance in Homo sapiens (human) NCBITAXONHomo sapiens hsa04360

### Large-scale models

| e_coli_core L3V1 fbc-v2 E.coli core metabolism Escherichia coli str. K-12 substr. MG1655 BiGG
| HepatoNet1 L2V3 Genome-scale reconstruction of human liver metabolism. NCBITAXONHomo sapiens PMID:20823849
| iIT341 L3V1 fbc-v2 BiGG Helicobacter pylori 26695 PMID:16077130

### Model repositories

SBML models are available in one of the SBML model repositories

| BioModels
| JWS online
| BiGG