CyCommunityDetection

Integrates multiscale community detection and functional enrichment for network analysis.
Categories: clustering, Community detection, Gene Ontology, network analysis, test
CyCommunityDetection, the Cytoscape App component of Community Detection APplication and Service (CDAPS), performs multiscale community detection and functional enrichment for network analysis through a service-oriented architecture. These features are provided by integrating popular community detection algorithms and enrichment tools. All the algorithms and tools run remotely on a dedicated server. Currently supported features: * Community detection algorithms: Louvain, Infomap, OSLOM, CliXO * Functional enrichment tools: g:Profiler, Enrichr, iQuery test test
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1.11.0

Works with Cytoscape 3.7

Release Notes

* Added support for new edge list format COMMUNITYDETECTRESULTV2 allowing Community Detection algorithms to add additional custom node columns. UD-1091 Bug fixes * Fixed bug where `View Interactions for Selected Node` no longer worked if a session was reloaded. UD-1087 * Fixed bug where any values set in the community detection or functional enrichment dialogs were lost when when reopening those dialogs. [https://github.com/cytoscape/cy-community-detection/issues/3 Issue 3]

1.10.0

Works with Cytoscape 3.7

Release Notes

* Added new menu option `App -> Community Detection -> Settings` that lets caller easily change CDAPS REST server. UD-1066 * Added message letting user know using weight column in Community Detection dialog is an advanced parameter. UD-988 * In Community Detection dialog replaced **About** button with info icon next to algorithm selection dropdown. UD-987 Bug fixes * Fixed bug where changes to properties under `Edit -> Properties -> CyCommunityDetection` were not being loaded. UD-986

1.0

Works with Cytoscape 3.7

CYTOSCAPE 3

Version 1.11.0

Released 18 May 2020

Works with Cytoscape 3.7

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